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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946240.1_cds_XP_016488470.1_79102
CDS Infomation

[gene=LOC107808458] [db_xref=GeneID:107808458] [protein=ribosomal RNA small subunit methyltransferase NEP1-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016488470.1] [location=complement(join(<92356..92371,93741..93798,93877..93959,94047..94157,94497..94641,97397..97489,97698..97958))] [gbkey=CDS]
Sequence

ATGGTGCGAGCGTACAAAGTTAAAGGGGAAAAGAGGAAAAAGAAAGGAGAGAATTATGAT
AAGGAAGAAATAGAGGAAGCTTTGGAAGAGGAGTCAGCAAAAAGAGCGAGAACAGAACAC
ACCGAAGCAGACACTGAGGCAGCTGAACGAGTTGTAGATTTACTGGCTGGTATTCCGGTT
GTTTCAACTGATCGAAGCACCAAACCTGGTATTATTTTCATCATCGAAAGAGCTTCCCTG
GAAATTGCTAAAATTGGAAAGACTTACCAACTTCTGAACTCAGATGAGCATTCCAACTTT
CTGAAGAAGAACAATCGAAACCCTTCTGATTATCGACCTGATATTGCTCATCAGGCAATG
CTTTCAATTTTAGATAGCCGAGTGAATAAAGCTGGGAGATTAAAAGCTTTGTATGTGAAG
ACCGAGAAAGGTGTCCTATTTGAAGTAAAACCTCATGTTCGTATCCCTAGGACGTTTAAA
CGATTTGCTGGCATTATGTTGCAGCTGCTACAAAAGCTGAGCATAACTGCTGTTGGTAAG
CGAGAGAAACTGTTACGTGTTATAAAAAACCCTGTTTCAAAGTACCTACCCATTGACTGT
CGGAAGATAGGCTTCTCTCATAGTTCTGAGAAGCTGGTGGATATTCAGGAATATGTTAAT
GGCATCAACAAGGACATGAACCTTGTTTTTGTGGTTGGGGCAATGGCCCACGGGAAAATT
GATAAAGATTATGTCGAAGATTATCTATCGATTTCTGATTATCCATT

Peptide Sequence

PEP ID

XP_016488470.1
PEP Infomation

PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Nicotiana tabacum]
Sequence

MVRAYKVKGEKRKKKGENYDKEEIEEALEEESAKRARTEHTEADTEAAERVVDLLAGIPV
VSTDRSTKPGIIFIIERASLEIAKIGKTYQLLNSDEHSNFLKKNNRNPSDYRPDIAHQAM
LSILDSRVNKAGRLKALYVKTEKGVLFEVKPHVRIPRTFKRFAGIMLQLLQKLSITAVGK
REKLLRVIKNPVSKYLPIDCRKIGFSHSSEKLVDIQEYVNGINKDMNLVFVVGAMAHGKI
DKDYVEDYLSISDYPFALHSICDHGYAVCSTQWIIGN

Transcript Sequence

Gene sequence data has not been registered.